Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907225.1_cds_XP_016457364.1_51098
CDS Infomation

[gene=LOC107781208] [db_xref=GeneID:107781208] [protein=E3 ubiquitin-protein ligase RNF8-like] [protein_id=XP_016457364.1] [location=complement(join(25616..25826,28481..28715,28818..28884,28988..29138,30369..30466))] [gbkey=CDS]
Sequence

ATGAATAGGGGAGGAATAGGAATAGGAGGGCCAATGCGAAGGTCGTTTAAGGATTCTCTC
AAAGTTCTTGAAGCTGATATTCAGCATGCTAATACTCTAGCATCTGACTTTTCCAGAGAG
TACGATGGAGCTTGCCTACAGATGCGAATGTCCTACAGTCCAGCTGCGCACCTCTTCCTT
TTCTTAGTGCAGTGGACTGATTGCCACCTTGCTGGTGCCCTTGGATTATTGAGAATTCTA
ATTTACAAGGTTTATGTTGATGGCACCACAACCATGTCAACTCATGAAAGGAAAGCAAGC
ATTAGGGAATTCTATGCTGTTATTTATCCCTCCTTACTTCAACTTGAAAGAGGTGTTACG
GATTCAGAAGACAAAAAGCAAAAAGCAGTTTGCTCGGAGAGATACAGGAGAAGAGATGAT
GAGGATTACAGACAGTCTTCTGACTCGGACATTGAAAGGGAAGACGAATGTGGAATCTGC
ATGGAAATGAACAGCAAAATTGTCCTTCCCAAATGCAATCACGCCCTGTGCTTGAAATGC
TATCATGAATGGCGTTCAAGGTCACAGTCATGCCCCTTCTGCCGTGATAGCCTTAAAAGG
GTAAACTCCGGGGACCTGTGGGTATACATGGATAACAAAGACGTCGTGGACATGACAACG
ATAACAAGGGAGAACCTTAGAAGGCTATTCATGTATATAGAGAAGTTACCCTTGATCGTG
CCGGATAACGTATTTGACCACTATGACACTCATATAAGGTAG

Peptide Sequence

PEP ID

XP_016457364.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Nicotiana tabacum]
Sequence

MNRGGIGIGGPMRRSFKDSLKVLEADIQHANTLASDFSREYDGACLQMRMSYSPAAHLFL
FLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLERGVT
DSEDKKQKAVCSERYRRRDDEDYRQSSDSDIEREDECGICMEMNSKIVLPKCNHALCLKC
YHEWRSRSQSCPFCRDSLKRVNSGDLWVYMDNKDVVDMTTITRENLRRLFMYIEKLPLIV
PDNVFDHYDTHIR

Transcript Sequence

Gene sequence data has not been registered.